#NEXUS

BEGIN TAXA;
	DIMENSIONS NTAX=27;
	TAXLABELS
		'Sargocentron vexillarium'
		'Beryx decadactylus'
		'Polymixia berndti'
		'Lateolabrax japonicus'
		'Mioplosus labricoides'
		'Priscacara serrata'
		'Priscacara liops'
		'Roccus saxatilis'
		'Roccus chrysops'
		'Morone americana'
		'Morone mississippiensis'
		'Dicentrarchus labrax'
		'Lates mariae'
		'Lates calcarifer'
		'Siniperica'
		'Centropomus parallelus'
		'Centropomus undecimalis'
		'Mycteroperca tigris'
		'Serranus subligarius'
		'Macquaria australasica'
		'Percichthys trucha'
		'Lepomis macrochirus'
		'Micropterus dolomieu'
		'Perca flavescens'
		'Stizostedion vitreum'
		'Pseudaphritis urvillii'
		'Niphon'
	;
ENDBLOCK;



BEGIN CHARACTERS;
	DIMENSIONS NCHAR=77;
	FORMAT DATATYPE=STANDARD MISSING=? GAP=- SYMBOLS="0123";

	CHARLABELS
		 [1] 'Vomer, shape of tooth patch'
		 [2] 'Orbitosphenoid'
		 [3] 'Pterotic, enclosure of lateral line canal'
		 [4] 'Frontals, midline suture'
		 [5] 'Frontoparietal crests'
		 [6] 'Frontoparietal crests, sensory pore on dorsal margin'
		 [7] 'Supraoccipital crest, shape'
		 [8] 'Supraoccipital crest, horizontal shelf projecting laterally at mid-height'
		 [9] 'Supraoccipital crest, shape of dorsal margin'
		 [10] 'Sphenotic, horizontal shelf'
		 [11] 'Mesethmoid, anterolaterally facing projection'
		 [12] 'Lateral ethmoid-lacrimal articulation, orientation'
		 [13] 'Lacrimal, shape'
		 [14] 'Lacrimal, serration on ventral margin'
		 [15] 'Non-lacrimal suborbital bones, ventral margins'
		 [16] 'Subocular shelf present on third infraorbital'
		 [17] 'Subocular shelf, shape'
		 [18] 'Subocular shelf, anterior extension'
		 [19] 'Post-temporal, ornamentation of posterior margin'
		 [20] 'Post-temporal, depression on medial face'
		 [21] 'Epiotic, strong posterior projection'
		 [22] 'Symplectic, shape'
		 [23] 'Metapterygoid lamina'
		 [24] 'Exoccipital, articular facet shape'
		 [25] 'Ethmovomerine region, number of facets for articulation with palatine'
		 [26] 'Premaxilla, articular and ascending processes'
		 [27] 'Premaxilla, lateral ridge running dorsoventrally on articular process'
		 [28] 'Premaxilla, shape of dorsal crest'
		 [29] 'Premaxilla, maxillary shelf or groove on external surface'
		 [30] 'Supramaxillary bones'
		 [31] 'Dentary teeth morphology'
		 [32] 'Basihyal dentition'
		 [33] 'Ceratohyal foramen'
		 [34] 'Ceratohyal foramen development'
		 [35] 'Opercular spine count'
		 [36] 'Urohyal, posterior margin'
		 [37] 'Shape of articular process of urohyal'
		 [38] 'Morphology of ventral surface of urohyal'
		 [39] 'Spine of urohyal shape'
		 [40] 'Preoperculum, noteworthy spine on posterior margin of corner'
		 [41] 'Preopercule, ornamentation of the ventral border of the horizontal limb'
		 [42] 'Interopercle, ornamentation of margin'
		 [43] 'Subopercle, ornamentation of margin'
		 [44] 'Preopercle, enclosure of sensory canal on ascending limb'
		 [45] 'Preopercle, enclosure of sensory canal on horizontal limb'
		 [46] 'Precaudal vertebrae, number'
		 [47] 'Second neural spine, expansion'
		 [48] 'Fourth neural spine, articulation with dorsal pterygiophores'
		 [49] 'Posterior abdominal haemal arches'
		 [50] 'First haemal spine, configuration'
		 [51] 'First haemal spine, transverse expansion'
		 [52] 'First haemal spine, anterior face'
		 [53] 'Uroneural pair, number'
		 [54] 'Epural count'
		 [55] 'Hypurals, fusion'
		 [56] 'Hypurapophysis'
		 [57] 'Length of spinous dorsal fin'
		 [58] 'Supraneural bones, number'
		 [59] 'Supernumerary dorsal fin spines'
		 [60] 'Caudal fin ray count'
		 [61] 'Caudal fin shape'
		 [62] 'Caudal fin, spur on posteriormost procurrent ray'
		 [63] 'Ray preceeding spur shortened'
		 [64] 'Anal pterygiophores, number anterior to first haemal spine'
		 [65] 'Anal fin spine count'
		 [66] 'First anal pterygiophore, associated anal spines'
		 [67] 'Proximal radial of the first anal fin pterygiophore, anteromedial ridge'
		 [68] 'Radial attachment to scapulocoracoid'
		 [69] 'Cleithrum, ornamentation on posterior margin'
		 [70] 'Cleithrum, ventral expansion on posterior plate'
		 [71] 'Pelvic bones, post-pelvic process'
		 [72] 'Pelvic bones, shape of post-pelvic process'
		 [73] 'Pelvic bones, accessory sub-pelvic keel'
		 [74] 'Pattern of posterior scalelet distribution'
		 [75] 'Scales, resorption of old ctenii'
		 [76] 'Lateral line, auxiliary row of lateral line scales above/below the main row'
		 [77] 'Lateral line, expansion onto posterior margin of caudal fin'
	;
	
	STATELABELS
		1
		'Trapezoidal to ovate'
		'Narrow, v-shaped tooth patch'
		'Vomerine teeth reduced to a few large teeth'
		,
		2
		'Present'
		'Absent'
		,
		3
		'absent or incomplete'
		'complete'
		,
		4
		'joined along entire midline'
		'separated by supraoccipital crest'
		,
		5
		'absent'
		'present'
		,
		6
		'absent'
		'present'
		,
		7
		'long and low'
		'height and length roughly equal'
		,
		8
		'present'
		'absent'
		,
		9
		'blade-like'
		'significantly expanded laterally'
		,
		10
		'absent'
		'present'
		,
		11
		'absent'
		'present'
		,
		12
		'entirely or primarily in the horizontal plane'
		'primarily in the vertical plane'
		,
		13
		'rectangular'
		'square'
		,
		14
		'present'
		'absent'
		,
		15
		'serrate'
		'smooth'
		,
		16
		'present'
		'absent'
		,
		17
		'quadrangular'
		'ovate'
		,
		18
		'present'
		'absent'
		,
		19
		'Denticulate'
		'Smooth'
		,
		20
		'Absent'
		'Present, connection site of post-temporal with tunica externa'
		,
		21
		'Absent'
		'Present'
		,
		22
		'straight or slightly tapered'
		'with sharp anterior bend'
		,
		23
		'Broad and well-developed'
		'reduced to a notch and a ridge'
		,
		24
		'Ovate'
		'Bean-shaped'
		,
		25
		'one'
		'two'
		,
		26
		'indistinct'
		'separate along entire margine'
		,
		27
		'absent'
		'present'
		,
		28
		'flat to convex'
		'triangular'
		,
		29
		'present'
		'absent'
		,
		30
		'present'
		'absent'
		,
		31
		'villiform'
		'caniniform'
		,
		32
		'absent'
		'present'
		,
		33
		'present'
		'absent'
		,
		34
		'complete'
		'incomplete, partial loss of upper strut'
		,
		35
		'0/1'
		'2'
		'3'
		,
		36
		'concave or flat'
		'convex'
		,
		37
		'strut-like, cylindrical'
		'flattened laterally into a blade-like structure'
		,
		38
		'v-shaped channel or incomplete tube'
		'flate and perpendicular to the dorsoventral axis, or convex'
		,
		39
		'fused to form single spine'
		'spine bifurcate'
		,
		40
		'absent'
		'present'
		,
		41
		'serrate'
		'large, triangular spines'
		'smooth'
		,
		42
		'serrate'
		'smooth'
		,
		43
		'serrate'
		'smooth'
		,
		44
		'contained in open "gutter"'
		'partially enclosed'
		,
		45
		'contained in open channel'
		'partially enclosed'
		,
		46
		'10-12'
		'14 or more'
		,
		47
		'does not contact first neural spine'
		'partial articulation between first and second neural spines'
		'second spine contacts first along entire border'
		,
		48
		'without specialized groove'
		'with groove for insertion of third dorsal pterygiophore'
		,
		49
		'bridged ventrally'
		'open'
		,
		50
		'first haemal spine fused to parapophyses'
		'partial fusion only'
		,
		51
		'absent, transverse processes directed ventrally or ventromedially'
		'present, transverse processes directed ventrolaterally, forming a wing-shaped projection'
		,
		52
		'flat or slightly folded anteriorly'
		'forming a sharp, anteromedially-directed groove'
		,
		53
		'two'
		'one'
		,
		54
		'three'
		'two'
		,
		55
		'absent'
		'present between hypurals three and four'
		,
		56
		'absent'
		'present'
		,
		57
		'shorter than soft-rayed dorsal fin'
		'longer than or subequal in length to soft-rayed dorsal fin'
		,
		58
		'three'
		'two'
		'one'
		,
		59
		'present, two or more spines attach to first pterygiophore'
		'absent, one spine in serial correspondence only'
		,
		60
		'17 or more'
		'15'
		'State 2'
		,
		61
		'deeply forked'
		'shallowly forked'
		'straight to slightly convex'
		,
		62
		'absent'
		'present'
		,
		63
		'ray not shortened'
		'ray shortened'
		,
		64
		'one'
		'two'
		'three or more'
		,
		65
		'four'
		'three'
		'two'
		,
		66
		'two'
		'one'
		,
		67
		'wide'
		'narrow'
		,
		68
		'radials i-iii insert on scapula, iv in the interspace between scapula and coracoid'
		'i-ii insert on scapula, iii inserts in interspace, iv inserts on coracoid'
		,
		69
		'denticulate'
		'smooth'
		,
		70
		'absent'
		'present'
		,
		71
		'absent'
		'present'
		,
		72
		'spearhead or knob-shaped'
		'short, massive expansion'
		,
		73
		'present'
		'absent'
		,
		74
		'imbricate, cycloid, or pseudoctenoid'
		'ordered, columnar distribution'
		,
		75
		'absent to slight'
		'strong'
		'complete'
		,
		76
		'absent'
		'present'
		,
		77
		'absent or nearly so'
		'significant (>1/3 of caudal fin depth)'
		,
	;
	
	MATRIX
	'Sargocentron vexillarium'		          00000?00000000000000000000010000000000010000001000000001101000000000010?00000
	'Beryx decadactylus'		                00000??00000000001??000?00001000000000?000000010?00?000?001000010??0?00??0000
	'Polymixia berndti'		                 00000?00000000000000000?00000001000000?00000000000000001000000000000100?00000
	'Lateolabrax japonicus'		             01011000111101100100100111100000011110111110011011000001101111101000011001201
	'Mioplosus labricoides'		             1?111?0011?????0??0?1?0?1110100?0011?0?01??00010?1??00011011111020?0?1???0001
	'Priscacara serrata'		                1?011?1?100?00?00?0?10??0111010?0010101011100000??0?00011001111010100110112??
	'Priscacara liops'		                  1?011?1?100????0????10??0111010?001?101001100000??0?00011001111010100110112??
	'Roccus saxatilis'		                  11011011100100100100100001110101011110100110000000000001100111101010011011211
	'Roccus chrysops'		                   11011001100100100100100001110101011110100110000000000001100111101010011011211
	'Morone americana'		                  11011011100100100100100001110101011100100000000000000001100111101010011011211
	'Morone mississippiensis'		           11011011100100100100100001110101011100100000000000000001100111101010011011211
	'Dicentrarchus labrax'		              01011001100100100100100001100101011000101110000000000001100101101010010?11211
	'Lates mariae'		                      01111100111100101101111111100000000110111111101101000101101111101000011100011
	'Lates calcarifer'		                  011111001111001011??111111100000001?1111111110110100010110112110100001??000?1
	'Siniperica'		                        01100?00110001101101110111100000000????11111101100010011100011101010111010000
	'Centropomus parallelus'		            11001000100000000100000000000000000001100110002000000001100101101000101100001
	'Centropomus undecimalis'		           11001000100000000100000000000000000001100110002000000001100101101000101100001
	'Mycteroperca tigris'		               110010000000001010100000111110101?2001002111002000001011100210001001100?00100
	'Serranus subligarius'		              110110000000011010000000011111101?2011000110001000001011100110001000101000100
	'Macquaria australasica'		            11001010000000101000000010011000010010000001001011110001100111111001010?00000
	'Percichthys trucha'		                01000?10000000101000001?10001000010010000000001001110001101111111001100?00000
	'Lepomis macrochirus'		               0101101100001111??10000000011100000010002111100011110001101110011010100?00000
	'Micropterus dolomieu'		              0100100000000111??10000001011000000010002111100011110001100110011010100?00000
	'Perca flavescens'		                  11000?1010000111??00000011011100010010000000111011001001111210002111011001200
	'Stizostedion vitreum'		              21000?0000000111??00100111011110010011001000111011001001111210012111111001201
	'Pseudaphritis urvillii'		            11010?000???0111??10000??10111001?0000000000?10110001?010212?001211111???1200
	'Niphon'		                            ??1?0?0?010?0011???00?00??0?????00?01001?????1???00?1001110?100?10??1010?1200
	;
ENDBLOCK;

BEGIN NOTES;
	
	[Character comments]
	TEXT CHARACTER=12 TEXT='Waldman, 1986';
	TEXT CHARACTER=17 TEXT='Carpenter and Johnson, 2002';
	TEXT CHARACTER=18 TEXT='Carpenter and Johnson, 2002';
	TEXT CHARACTER=20 TEXT='Otero, 2004';
	TEXT CHARACTER=21 TEXT='Otero, 2004';
	TEXT CHARACTER=23 TEXT='Otero, 2004';
	TEXT CHARACTER=24 TEXT='Otero, 2004';
	TEXT CHARACTER=26 TEXT='Modified from Day, 2002';
	TEXT CHARACTER=27 TEXT='Otero, 2004';
	TEXT CHARACTER=28 TEXT='Day, 2002';
	TEXT CHARACTER=40 TEXT='Otero, 2004';
	TEXT CHARACTER=48 TEXT='Waldman, 1986';
	TEXT CHARACTER=49 TEXT='Chang, 1988';
	TEXT CHARACTER=50 TEXT='Otero, 2004';
	TEXT CHARACTER=51 TEXT='Chang, 1988';
	TEXT CHARACTER=52 TEXT='Chang, 1988';
	TEXT CHARACTER=53 TEXT='Otero, 2004';
	TEXT CHARACTER=54 TEXT='Otero, 2004';
	TEXT CHARACTER=55 TEXT='Otero, 2004';
	TEXT CHARACTER=62 TEXT='Johnson, 1975';
	TEXT CHARACTER=63 TEXT='Johnson, 1975';
	TEXT CHARACTER=64 TEXT='Chang, 1988';
	TEXT CHARACTER=67 TEXT='Chang, 1988';
	TEXT CHARACTER=68 TEXT='Johnson, 1975';
	TEXT CHARACTER=69 TEXT='Otero, 2004';
	TEXT CHARACTER=70 TEXT='Otero, 2004';
	TEXT CHARACTER=72 TEXT='modified from Otero, 2004';
	TEXT CHARACTER=74 TEXT='McCully, 1963';
	TEXT CHARACTER=75 TEXT='McCully, 1962';

	[Attribute comments]
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BEGIN PAUP;
outgroup Sargocentron_vexillarium ; outgroup Polymixia_berndti ; outgroup Beryx_decadactylus ;
ENDBLOCK;
BEGIN TREES;
Title Trees from "WhitlockMatrix" ; LINK Taxa = Taxa ; TRANSLATE 1 Sargocentron_vexillarium , 2 Beryx_decadactylus , 3 Polymixia_berndti , 4 Lateolabrax_japonicus , 5 Mioplosus_labricoides , 6 Priscacara_serrata , 7 Priscacara_liops , 8 Roccus_saxatilis , 9 Roccus_chrysops , 10 Morone_americana , 11 Morone_mississippiensis , 12 Dicentrarchus_labrax , 13 Lates_mariae , 14 Lates_calcarifer , 15 Siniperca , 16 Centropomus_parallelus , 17 Centropomus_undecimalis , 18 Mycteroperca_tigris , 19 Serranus_subligarius , 20 Macquaria_australasica , 21 Percichthys_trucha , 22 Lepomis_macrochirus , 23 Micropterus_dolomieu , 24 Perca_flavescens , 25 Stizostedion_vitreum , 26 Pseudaphritis_urvillii , 27 Niphon ; TREE UNTITLED+ = (1 , (2 , 3) , ((((((6 , ((8 , 9 , (11 , 10)) , 7)) , 12) , ((5 , 4) , (15 , 13))) , (17 , 16)) , (18 , 19) , (22 , 23)) , (21 , ((25 , 24) , 20)))) ;
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