List Pathway Names — listPathwayNames • rWikiPathways
Description: Retrieve list of pathway names per species.

# List Pathway Names

Source: `R/listPathways.R`
`listPathwayNames.Rd`

Retrieve list of pathway names per species.

    listPathwayNames(organism = "")

## Arguments

organism | (`character`, optional) A particular species. See listOrganisms. Default is all species.

## Value

A `list` of names

## Details

Basically returns a subset of listPathways result

## See also

listPathways

## Examples

    {
    listPathwayNames('Mus musculus')
    }
    #>   [1] "Statin Pathway"
    #>   [2] "IL-9 Signaling Pathway"
    #>   [3] "Cholesterol Biosynthesis"
    #>   [4] "Selenium metabolism/Selenoproteins"
    #>   [5] "TGF Beta Signaling Pathway"
    #>   [6] "Hedgehog Signaling Pathway"
    #>   [7] "Glucuronidation"
    #>   [8] "Non-homologous end joining"
    #>   [9] "EBV LMP1 signaling"
    #>  [10] "Estrogen signaling"
    #>  [11] "Keap1-Nrf2"
    #>  [12] "Hypothetical Network for Drug Addiction"
    #>  [13] "Methylation"
    #>  [14] "Oxidative phosphorylation"
    #>  [15] "EPO Receptor Signaling"
    #>  [16] "Arachidonate Epoxygenase   Epoxide Hydrolase"
    #>  [17] "Metapathway biotransformation"
    #>  [18] "Amino acid conjugation of benzoic acid"
    #>  [19] "Type II interferon signaling (IFNG)"
    #>  [20] "Apoptosis"
    #>  [21] "NLR Proteins"
    #>  [22] "Mismatch repair"
    #>  [23] "Homologous recombination"
    #>  [24] "Retinol metabolism"
    #>  [25] "ErbB signaling pathway"
    #>  [26] "Aflatoxin B1 metabolism"
    #>  [27] "Mitochondrial Gene Expression"
    #>  [28] "Estrogen metabolism"
    #>  [29] "Polyol pathway"
    #>  [30] "SIDS Susceptibility Pathways"
    #>  [31] "Fatty Acid Beta Oxidation"
    #>  [32] "Endochondral Ossification"
    #>  [33] "Toll-like receptor signaling pathway"
    #>  [34] "Selenium Micronutrient Network"
    #>  [35] "Folic Acid Network"
    #>  [36] "Oxidation by Cytochrome P450"
    #>  [37] "Non-odorant GPCRs"
    #>  [38] "Odorant GPCRs"
    #>  [39] "Orphan GPCRs"
    #>  [40] "Oxidative Damage"
    #>  [41] "Dopaminergic Neurogenesis"
    #>  [42] "DNA Replication"
    #>  [43] "SHH, FGF8, Stat3"
    #>  [44] "IL-5 Signaling Pathway"
    #>  [45] "Regulation of Cardiac Hypertrophy by miR-208"
    #>  [46] "MicroRNAs in Cardiomyocyte Hypertrophy"
    #>  [47] "Glycolysis and Gluconeogenesis"
    #>  [48] "Iron Homeostasis"
    #>  [49] "Cytoplasmic Ribosomal Proteins"
    #>  [50] "Glutathione metabolism"
    #>  [51] "Apoptosis Modulation by HSP70"
    #>  [52] "Acetylcholine Synthesis"
    #>  [53] "PluriNetWork: mechanisms associated with pluripotency"
    #>  [54] "One carbon metabolism and related pathways"
    #>  [55] "Kennedy pathway"
    #>  [56] "Heme Biosynthesis"
    #>  [57] "GPCRs, Class A Rhodopsin-like"
    #>  [58] "Cell cycle"
    #>  [59] "Signaling of Hepatocyte Growth Factor Receptor"
    #>  [60] "Splicing factor NOVA regulated synaptic proteins"
    #>  [61] "Complement Activation, Classical Pathway"
    #>  [62] "Ptf1a related regulatory pathway"
    #>  [63] "Hypertrophy Model"
    #>  [64] "Heart Development"
    #>  [65] "Nucleotide GPCRs"
    #>  [66] "Neural Crest Differentiation"
    #>  [67] "Alzheimers Disease"
    #>  [68] "miRs in Muscle Cell Differentiation"
    #>  [69] "Serotonin Receptor 2 and STAT3 Signaling"
    #>  [70] "SRF and miRs in Smooth Muscle Differentiation and Proliferation"
    #>  [71] "Cell Differentiation - Index"
    #>  [72] "Nicotine Activity on Dopaminergic Neurons"
    #>  [73] "SREBF and miR33 in cholesterol and lipid homeostasis"
    #>  [74] "miRNAs involved in DNA damage response"
    #>  [75] "Serotonin and anxiety-related events"
    #>  [76] "Serotonin and anxiety"
    #>  [77] "BDNF Pathway"
    #>  [78] "Striated Muscle Contraction"
    #>  [79] "S1P pathways and spinal cord injury"
    #>  [80] "Purine metabolism"
    #>  [81] "Cytokines and Inflammatory Response"
    #>  [82] "Macrophage markers"
    #>  [83] "Chemokine signaling pathway"
    #>  [84] "XPodNet - protein-protein interactions in the podocyte expanded by STRING"
    #>  [85] "PodNet: protein-protein interactions in the podocyte"
    #>  [86] "PPAR signaling pathway"
    #>  [87] "Fatty acid oxidation"
    #>  [88] "G Protein Signaling Pathways"
    #>  [89] "Peptide GPCRs"
    #>  [90] "miRNAs and TFs in iPS Cell Generation"
    #>  [91] "Osteoblast"
    #>  [92] "Alanine and aspartate metabolism"
    #>  [93] "Spinal Cord Injury"
    #>  [94] "TNF-alpha NF-kB Signaling Pathway"
    #>  [95] "MAPK Cascade"
    #>  [96] "Androgen Receptor Signaling Pathway"
    #>  [97] "Dantrolene Metabolic Pathway"
    #>  [98] "Primary Focal Segmental Glomerulosclerosis FSGS"
    #>  [99] "TGF-beta Receptor Signaling Pathway"
    #> [100] "Limb Development"
    #> [101] "Limb and Fin Development"
    #> [102] "Delta-Notch Signaling Pathway"
    #> [103] "Ovarian Infertility Genes"
    #> [104] "B Cell Receptor Signaling Pathway"
    #> [105] "Focal Adhesion-PI3K-Akt-mTOR-signaling pathway"
    #> [106] "Gene regulatory network modelling somitogenesis "
    #> [107] "White fat cell differentiation"
    #> [108] "Notch Signaling Pathway"
    #> [109] "p53 signaling"
    #> [110] "Mir302-367 Promoting Cardiomyocyte Proliferation"
    #> [111] "Mecp2 and Associated Rett Syndrome"
    #> [112] "miR-222 in Exercise-Induced Cardiac Growth"
    #> [113] "Electron Transport Chain"
    #> [114] "IL-7 Signaling Pathway"
    #> [115] "G13 Signaling Pathway"
    #> [116] "Histone modifications"
    #> [117] "Translation Factors"
    #> [118] "mRNA processing"
    #> [119] "Glycogen Metabolism"
    #> [120] "Eicosanoid Synthesis"
    #> [121] "GPCRs, Class C Metabotropic glutamate, pheromone"
    #> [122] "MAPK signaling pathway"
    #> [123] "Fatty Acid Omega Oxidation"
    #> [124] "Fatty Acid Biosynthesis"
    #> [125] "ESC Pluripotency Pathways"
    #> [126] "Adar1 editing defficiency immune response"
    #> [127] "p38 MAPK Signaling Pathway"
    #> [128] "Small Ligand GPCRs"
    #> [129] "Glycolysis"
    #> [130] "TCA Cycle (streamlined)"
    #> [131] "Fatty Acid Beta Oxidation (streamlined)"
    #> [132] "ApoE and miR-146 in inflammation and atherosclerosis"
    #> [133] "TYROBP Causal Network"
    #> [134] "Microglia Pathogen Phagocytosis Pathway"
    #> [135] "Lung fibrosis"
    #> [136] "Parkinsons Disease Pathway"
    #> [137] "EDA Signalling in Hair Follicle Development"
    #> [138] "Novel Jun-Dmp1 Pathway"
    #> [139] "BMP Signaling Pathway in Eyelid Development"
    #> [140] " Hfe effect on hepcidin production"
    #> [141] "Factors and pathways affecting insulin-like growth factor (IGF1)-Akt signaling"
    #> [142] "IL-1 Signaling Pathway"
    #> [143] "IL-3 Signaling Pathway"
    #> [144] "Prostaglandin Synthesis and Regulation"
    #> [145] "Myometrial Relaxation and Contraction Pathways"
    #> [146] "Dysregulated miRNA Targeting in Insulin/PI3K-AKT Signaling"
    #> [147] "Wnt Signaling in Kidney Disease"
    #> [148] "Triacylglyceride Synthesis"
    #> [149] "Robo4 and VEGF Signaling Pathways Crosstalk"
    #> [150] "IL-6 signaling Pathway"
    #> [151] "ACE Inhibitor Pathway"
    #> [152] "mir-193a and MVP in colon cancer metastasis"
    #> [153] "miR-127 in mesendoderm differentiation"
    #> [154] "Mitochondrial LC-Fatty Acid Beta-Oxidation"
    #> [155] "Wnt Signaling Pathway"
    #> [156] "Kit Receptor Signaling Pathway"
    #> [157] "GPCRs, Other"
    #> [158] "Oxidative Stress"
    #> [159] "G1 to S cell cycle control"
    #> [160] "Distal Convoluted Tubule 1 (DCT1) Cell"
    #> [161] "Mechanism of Neuromodulatory Action of Exogenous Oxytocin and Antagonist by GABAergic Transmission"
    #> [162] "Urea cycle and metabolism of amino groups"
    #> [163] "Ethanol metabolism resulting in production of ROS by CYP2E1"
    #> [164] "Nuclear receptors in lipid metabolism and toxicity"
    #> [165] "Eicosanoid Lipid Synthesis Map"
    #> [166] "TCA Cycle"
    #> [167] "Sphingolipid Metabolism (general overview)"
    #> [168] "Glycerolipids and Glycerophospholipids"
    #> [169] "Cholesterol metabolism (includes both Bloch and Kandutsch-Russell pathways)"
    #> [170] "Eicosanoid metabolism via Cyclo Oxygenases (COX)"
    #> [171] "Eicosanoid metabolism via Lipo Oxygenases (LOX)"
    #> [172] "Eicosanoid metabolism via Cytochrome P450 Mono-Oxygenases (CYP) pathway"
    #> [173] "One Carbon Metabolism"
    #> [174] "Omega-3/Omega-6 FA synthesis"
    #> [175] "Omega-9 FA synthesis"
    #> [176] "PDGFR&alpha; and STMN1 cooperate to exacerbate the cytotoxic effects of vinblastine"
    #> [177] "Matrix Metalloproteinases"
    #> [178] "Oxidative Stress and Redox Pathway"
    #> [179] "Adipogenesis genes"
    #> [180] "Circulating monocytes and cardiac macrophages in diastolic dysfunction"
    #> [181] "Complement and Coagulation Cascades"
    #> [182] "Elongation of (very) long chain fatty acids"
    #> [183] "IL-2 Signaling Pathway"
    #> [184] "Osteoclast"
    #> [185] "GPCRs, Class B Secretin-like"
    #> [186] "Inflammatory Response Pathway"
    #> [187] "Blood Clotting Cascade"
    #> [188] " Lipids measured in liver metastasis from breast cancer"
    #> [189] "Sphingolipid Metabolism (integrated pathway)"
    #> [190] "Immune response in Tg26 glomeruli"
    #> [191] "Irinotecan Pathway"
    #> [192] "Regulation of Pgc1a expression by a Gsk3b-Tfeb signaling axis in skeletal muscle"
    #> [193] "T Cell Receptor Signaling Pathway"
    #> [194] "GDNF/RET signalling axis"
    #> [195] "Peroxiredoxin 2 induced ovarian failure"
    #> [196] "Alpha6-Beta4 Integrin Signaling Pathway"
    #> [197] "MAPK signaling pathway"
    #> [198] "Glucocorticoid and Mineralcorticoid Metabolism"
    #> [199] "Deregulation of the Renin Angiotensin system by Sars-CoV infection"
    #> [200] "Hypoxia-Dependent Self-Renewal of Myoblasts"
    #> [201] "Hypoxia-Dependent Proliferation of Myoblasts"
    #> [202] "Hypoxia-Dependent Differentiation of Myoblasts"
    #> [203] "Na/K-ATPase/Src Signaling"
    #> [204] "Nuclear Receptors"
    #> [205] "Id Signaling Pathway"
    #> [206] "Proteasome Degradation"
    #> [207] "Biogenic Amine Synthesis"
    #> [208] "Regulation of Actin Cytoskeleton"
    #> [209] "Neural retinal development"
    #> [210] "Wnt Signaling Pathway NetPath"
    #> [211] "Synthesis and Degradation of Ketone Bodies"
    #> [212] "Exercise-induced Circadian Regulation"
    #> [213] "Steroid Biosynthesis"
    #> [214] "Calcium Regulation in the Cardiac Cell"
    #> [215] "Eukaryotic Transcription Initiation"
    #> [216] "Signal Transduction of S1P Receptor"
    #> [217] "Monoamine GPCRs"
    #> [218] "FAS pathway and Stress induction of HSP regulation"
    #> [219] "EGFR1 Signaling Pathway"
    #> [220] "Leptin Insulin Overlap"
    #> [221] "Integrin-mediated Cell Adhesion"
    #> [222] "miR-1 in cardiac development"
    #> [223] "Pentose Phosphate Pathway"
    #> [224] "Insulin Signaling"
    #> [225] "Amino Acid metabolism"
    #> [226] "Leptin and adiponectin"
    #> [227] "Wnt Signaling Pathway and Pluripotency"
    #> [228] "Glutathione and one carbon metabolism"
    #> [229] "Tryptophan metabolism"
    #> [230] "Focal Adhesion"
    #> [231] "Nucleotide Metabolism"
    #> [232] "Toll Like Receptor signaling"
    #> [233] "IL-4 signaling Pathway"