Report of DEG analysis • DEGreport
Description: Creation of a HTML report of differential expression analyses of count data. It integrates some of the code mentioned in DESeq2 and edgeR vignettes, and report a ranked list of genes according to the fold changes mean and variability for each selected gene.

# DEGreport

QCs, figures and analyses after differential expression with DESeq2 or other similar tool.

Pantano L (2017). DEGreport: Report of DEG analysis. R package version 1.13.8.

DOI: 10.18129/B9.bioc.DEGreport

## Installation

This is an R package.

### Bioconductor stable version

    if (!requireNamespace("BiocManager", quietly=TRUE))
        install.packages("BiocManager")
    BiocManager::install("DEGreport")

### Bioconductor latest version

    devtools::install_git("https://git@git.bioconductor.org/packages/DEGreport")

### devtools unstable version

    install.packages("devtools")
    devtools::install_github("lpantano/DEGreport")

Load the package and learn what to do:

`browseVignettes("DEGreport")`

Here is the last devel vignette.